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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834303.1_cds_XP_016505559.1_18888
CDS Infomation

[gene=LOC107823432] [db_xref=GeneID:107823432] [protein=probable pectate lyase P59] [protein_id=XP_016505559.1] [location=join(2834..3021,3484..4135,4244..4486,4704..4925)] [gbkey=CDS]
Sequence

ATGGAATTCACAAAGAATAATTTGTTTTTGTTTGTTATGTTTGTTCTAGTTCTTAGCATA
GAGGCACACATTGGGGAGTTTGATGAAGTGTGGCGGAAGCGAGCCCAGCAAGCAAAGAAG
GCCGCTCGCCATGCCTATCATCCTAATCCTAAGATTGTAGCCGATCATCTTAACAACCAA
GTTGACAAGGCCGTACGAGGCAGCAATAGCAGAAGAAGGGACCTGCACAGGTACAATGGT
CAATGCAAGGCGACGAATCCAATTGACCAGTGCTGGCGATGCGATCCAAATTGGGCTCGA
AACCGCATGAAACTAGCAGATTGCGTCCTTGGTTTTGGCCGCAAGACAACCGGAGGCAAA
GGTGGAAAAATCTACGTAGTAACTGACAATTCGGACAACGATTTAGTAAATCCCAAGCCA
GGAACTTTACGCCACGCCGTGATCCAGCCGCAGCCACTTTGGATTATATTTGCCAAGAAC
ATGGTAATTAGGTTAAACGAGGAGCTAATCATGACCAGCAACAAGACAATTGACGCCCGA
GGAAAGCAAGTGCACATTGCTCATGGTGGTGGCCTTATGTTACAGTTCATACACAATGTC
ATAATTAGTAACCTTCGAATTCATGATACTAAGGCTGGTAATGGTGGCCTAATTAGAGAC
TCCGTCAATCATTATGGTTATCGAACGAAAAGTGATGGTGATGGTATTTCAATCTTTGGA
TCCACAAATGTTTGGATTGACCACGTCTCCATGTCCAATTGTCAAGATGGTCTCATTGAT
GCTGTTGAGGCTTCGACAGCCATTACCATTTCCAACTGCCATTTCACTAAACATAATGAA
GTCATGTTGTTTGGAGCCAGTGATAGTTCCTCAAGGGACTCTATTATGCAAATAACACTT
GCTTTCAATCACTTTGGACAAGGGTTGAGGCAGAGGATGCCAAGAGTGAGATGGGGATTT
GTTCATGCTGTCAACAACGATTACACACACTGGCTAATGTATGCCATTGGAGGAAGCATG
CATCCTACCATCCTTAGCCAGGGAAATCGCTTCATCGCTCCCCCTAATCCAAACGCCAAA
GAGGTGACCAAAAGGGATTATGCACCTGAGAGCGTGTGGAAGAACTGGGTATGGAAATCA
CAGGGAGATCTTATGATGAACGGGGCGTTCTTTGTAGAATCTGGAAATCCAAATCATGCA
TTCTTGAGGAGTCCTGATATGATCAGCTCCAAGCCAGGATCATTTGTGAGCAGCCTGACA
CGATTTTCAGGCTCTCTAAACTGCATTGAGGGGAAGCCTTGTTAA

Peptide Sequence

PEP ID

XP_016505559.1
PEP Infomation

PREDICTED: probable pectate lyase P59 [Nicotiana tabacum]
Sequence

MEFTKNNLFLFVMFVLVLSIEAHIGEFDEVWRKRAQQAKKAARHAYHPNPKIVADHLNNQ
VDKAVRGSNSRRRDLHRYNGQCKATNPIDQCWRCDPNWARNRMKLADCVLGFGRKTTGGK
GGKIYVVTDNSDNDLVNPKPGTLRHAVIQPQPLWIIFAKNMVIRLNEELIMTSNKTIDAR
GKQVHIAHGGGLMLQFIHNVIISNLRIHDTKAGNGGLIRDSVNHYGYRTKSDGDGISIFG
STNVWIDHVSMSNCQDGLIDAVEASTAITISNCHFTKHNEVMLFGASDSSSRDSIMQITL
AFNHFGQGLRQRMPRVRWGFVHAVNNDYTHWLMYAIGGSMHPTILSQGNRFIAPPNPNAK
EVTKRDYAPESVWKNWVWKSQGDLMMNGAFFVESGNPNHAFLRSPDMISSKPGSFVSSLT
RFSGSLNCIEGKPC

Transcript Sequence

Gene sequence data has not been registered.